Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.700 Biomarker group BEFREE Mutations of KRAS, TP53 and NF1 were found at an increasing frequency from AIS/MIA to ADC. 31747302 2020
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.700 Biomarker group BEFREE Cases of UDEC had mutations in genes associated with endometrial adenocarcinomas (eg, TP53, PTEN, PIK3CA) and occasionally SMARCA4, while SDUS was characterized solely by inactivating mutations in SMARCA4. 31567195 2020
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.400 GeneticVariation group BEFREE PET/CT images of lung cancer patients were obtained from public databases and used to establish two datasets, respectively to classify histological subtypes (156 adenocarcinomas and 32 squamous cell carcinomas) and EGFR mutation status (38 mutant and 100 wild-type samples). 31659591 2020
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.400 GeneticVariation group BEFREE EGFR and KRAS mutations were found in 10.7% and 16.6% of all histologies, respectively, and in 14.9% and 21.9% of adenocarcinomas. 31659106 2020
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group BEFREE Mutations of KRAS, TP53 and NF1 were found at an increasing frequency from AIS/MIA to ADC. 31747302 2020
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.400 AlteredExpression group BEFREE Once a broad tumor class is established, more specific differentiation markers can be pursued (e.g., lineage-restricted transcription factors for adenocarcinoma; p40 for squamous cell carcinoma; chromogranin A and synaptophysin or INSM1 for neuroendocrine neoplasms). 31786484 2020
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.400 Biomarker group BEFREE Immunhistochemistry profiling of human endometrial cancer tissue biopsies identified epithelial cells co-expressing ERβ5 and ERα in stage I endometrial adenocarcinomas and post menopausal endometrium. 31778358 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.400 Biomarker group BEFREE HPV 16 and/or 18 were detected in 156 (80%) tumors. p16 was positive in 186 (96%) carcinomas, but eight tumors (4%) were negative for p16 (seven squamous cell carcinomas, one adenocarcinoma); 5/8 caused by HPV 16 and/or 18. 31492932 2020
Entrez Id: 54474
Gene Symbol: KRT20
KRT20
0.400 Biomarker group BEFREE Immunohistochemically, the adenocarcinomas were positive for CK7 (4/4), CEA (4/4), MUC6 (3/3), PAX8 (3/4), CK20 (2/4), CDX2 (2/4), and estrogen receptor (1/4). 31567280 2020
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.400 Biomarker group BEFREE Our findings suggest that the frequency of HER2 overexpression or amplification was low in Chinese CRC patients, and provide a rationale for further evaluation of HER2 in CRC based on the HERACLES criteria and the HER2 diagnostic criteria for gastroesophageal adenocarcinoma. 31720832 2020
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group BEFREE EGFR and KRAS mutations were found in 10.7% and 16.6% of all histologies, respectively, and in 14.9% and 21.9% of adenocarcinomas. 31659106 2020
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.400 GeneticVariation group BEFREE Of 9,992 Stage IIIB-IV NSCLC patients, the 1,419 (14%) who initiated EGFR TKI treatment during observation were younger (median age 68 vs. 71 years), less ≥1 comorbidities (34% vs. 46%), more often female (59% vs. 47%), Stage IV (89% vs. 85%) and adenocarcinoma (85% vs. 66%) compared to non-TKI treated patients. 31350754 2020
Entrez Id: 54474
Gene Symbol: KRT20
KRT20
0.400 Biomarker group BEFREE Biopsy findings revealed a moderately differentiated adenocarcinoma with immunohistochemical profile supporting prostate as the primary tumor site: negative for cytokeratin-7 and cytokeratin-20 and positive for prostate-specific antigen, prostate-specific acid phosphatase, and alpha-methylacyl-CoA-racemase. 30832497 2020
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.400 GeneticVariation group BEFREE EGFR L858R was more frequently harbored in the MP+ adenocarcinoma patients than in the MP- adenocarcinoma patients. 31732945 2020
Entrez Id: 5713
Gene Symbol: PSMD7
PSMD7
0.100 AlteredExpression group BEFREE Once a broad tumor class is established, more specific differentiation markers can be pursued (e.g., lineage-restricted transcription factors for adenocarcinoma; p40 for squamous cell carcinoma; chromogranin A and synaptophysin or INSM1 for neuroendocrine neoplasms). 31786484 2020
Entrez Id: 4582
Gene Symbol: MUC1
MUC1
0.100 Biomarker group BEFREE Intracholecystic papillary-tubular neoplasms show 5 histologic subcategories: (1) pyloric gland subtype which is the most commonly encountered neoplastic polyp in the gallbladder and has the lowest rate of harboring high-grade dysplasia and invasive carcinoma and it shows diffuse cytoplasmic positivity with MUC6, a specific pyloric marker; (2) biliary subtype which is diffusely positive for MUC1 and has the highest risk of concurrent adenocarcinoma; (3) gastric foveolar subtype which is MUC5AC positive in all the cases. 31815746 2020
Entrez Id: 1113
Gene Symbol: CHGA
CHGA
0.100 AlteredExpression group BEFREE Once a broad tumor class is established, more specific differentiation markers can be pursued (e.g., lineage-restricted transcription factors for adenocarcinoma; p40 for squamous cell carcinoma; chromogranin A and synaptophysin or INSM1 for neuroendocrine neoplasms). 31786484 2020
Entrez Id: 1048
Gene Symbol: CEACAM5
CEACAM5
0.100 GeneticVariation group BEFREE We found mutations encoding L640I and A643T in the B3 domain of human CEACAM5 in colorectal adenocarcinomas; structural studies indicated that these mutations would alter the interaction between CEACAM5 and TGFBR1. 31585122 2020
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.100 AlteredExpression group BEFREE A significant difference in PD-L1 expression between squamous-cell carcinoma and adenocarcinoma was observed with odds ratio for adenocarcinoma 1.8. 31383957 2020
Entrez Id: 400566
Gene Symbol: C17orf97
C17orf97
0.100 Biomarker group BEFREE Immunohistochemically, the adenocarcinomas were positive for CK7 (4/4), CEA (4/4), MUC6 (3/3), PAX8 (3/4), CK20 (2/4), CDX2 (2/4), and estrogen receptor (1/4). 31567280 2020
Entrez Id: 4586
Gene Symbol: MUC5AC
MUC5AC
0.100 Biomarker group BEFREE Intracholecystic papillary-tubular neoplasms show 5 histologic subcategories: (1) pyloric gland subtype which is the most commonly encountered neoplastic polyp in the gallbladder and has the lowest rate of harboring high-grade dysplasia and invasive carcinoma and it shows diffuse cytoplasmic positivity with MUC6, a specific pyloric marker; (2) biliary subtype which is diffusely positive for MUC1 and has the highest risk of concurrent adenocarcinoma; (3) gastric foveolar subtype which is MUC5AC positive in all the cases. 31815746 2020
Entrez Id: 9476
Gene Symbol: NAPSA
NAPSA
0.100 Biomarker group BEFREE Staining of desmosomal plaque-related proteins may be useful in the diagnosis of lung SCC.<b>Materials and methods:</b> We compared the usefulness of six conventional (CK5/6, p40, p63, CK7, TTF1, and Napsin A) and three novel (PKP1, KRT15, and DSG3) markers to distinguish between lung SCC and AC in 85 small biopsy specimens (41 ACs and 44 SCCs). 31809668 2020
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.100 Biomarker group BEFREE Subsequent FDG PET/CT showed high uptake in the SPN, revealing poorly differentiated adenocarcinoma at biopsy, but with no abnormal uptake in the para-aortic nodes. 31652158 2020
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.100 Biomarker group BEFREE Immunohistochemically, the adenocarcinomas were positive for CK7 (4/4), CEA (4/4), MUC6 (3/3), PAX8 (3/4), CK20 (2/4), CDX2 (2/4), and estrogen receptor (1/4). 31567280 2020
Entrez Id: 9181
Gene Symbol: ARHGEF2
ARHGEF2
0.100 AlteredExpression group BEFREE Once a broad tumor class is established, more specific differentiation markers can be pursued (e.g., lineage-restricted transcription factors for adenocarcinoma; p40 for squamous cell carcinoma; chromogranin A and synaptophysin or INSM1 for neuroendocrine neoplasms). 31786484 2020